Cyanorak | Organism Details

Concatenated Contigs

Cya_PCC6307

Description

Species
Cyanobium gracile
Strain
PCC6307
RCC N°
NCBI Taxonomy ID
292564
Genus
Cyanobium
SubCluster/Phototype
5.2
Clade
5.2
SubClade
5.2
Ecotype/ESTU
5.2A
Pigment Type
1
Ocean/Sea
Lake near Madison WI
Oceanic Region
n.a.
Latitude
43°5'59'' N (43.100 °)
Longitude
89°24'0'' W (-89.400 °)
Isolation Depth
n.a.
Isolated/Purified by
Fitzgerald GP
Isolation Date
1949-01-01
ENVO
00000021
Sequencing Center
JGI
Genome Status
Complete
GenBank Acc.
CP003495
RefSeq Acc.
NC_019675.1
Genome Size
3,342,364
GC %
68.7
Number of CDS
3,302
Number of rRNA
6
Number of tRNA
44

Reference(s)

Shih et al. (2013)

Comments

Isolated in 1949 in "one of the lakes surrounding the city of Madison" (Gerloff et al.1950). Coordinates are therefore approximative.

Export

Genes / Proteins

FASTA format : CDS (.fna) / RNA (.fna) / All genes (.fna) / Proteins (.faa)

Whole Genome / All Contigs

FASTA format : Concatenated contigs (.fna) / All contigs (.fna) / Individual contigs (.fna - zipped if multiple)
GenBank format : Concatenated contigs (.gbk) / All contigs (.gbff) / Individual contigs (.gbk - zipped if multiple)
GFF format : All contigs (.gff)

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