Cyanorak | Organism Details

Concatenated Contigs

Cya_PCC7001

Description

Species
Cyanobium sp.
Strain
PCC7001
RCC N°
NCBI Taxonomy ID
180281
Genus
Cyanobium
SubCluster/Phototype
5.2
Clade
5.2
SubClade
5.2
Ecotype/ESTU
5.2A
Pigment Type
1
Ocean/Sea
Atlantic Ocean
Oceanic Region
Long Island Sound
Latitude
40°15'18'' N (40.255 °)
Longitude
76°53'16'' W (-76.888 °)
Isolation Depth
0
Isolated/Purified by
Van Baalen C
Isolation Date
1961-06-01
ENVO
02000049
Sequencing Center
JCVI
Genome Status
WGS high quality
GenBank Acc.
ABSE01000000
RefSeq Acc.
NZ_ABSE01000000
Genome Size
2,832,412
GC %
68.7
Number of CDS
2,827
Number of rRNA
9
Number of tRNA
46

Reference(s)

Shih et al. (2013)

Comments

Isolated from intertidal mud from city Island, New York (USA) in 1961 (no precision on isolation day or month).

Salt tolerance: euryhaline

Export

Genes / Proteins

FASTA format : CDS (.fna) / RNA (.fna) / All genes (.fna) / Proteins (.faa)

Whole Genome / All Contigs

FASTA format : Concatenated contigs (.fna) / All contigs (.fna) / Individual contigs (.fna - zipped if multiple)
GenBank format : Concatenated contigs (.gbk) / All contigs (.gbff) / Individual contigs (.gbk - zipped if multiple)
GFF format : All contigs (.gff)

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