Cyanorak | Organism Details

Concatenated Contigs

Pro_MED4

Description

Species
Prochlorococcus marinus
Strain
MED4
RCC N°
NCBI Taxonomy ID
59919
Genus
Prochlorococcus
SubCluster/Phototype
HL
Clade
HLI
SubClade
HLI
Ecotype/ESTU
HLIA
Pigment Type
Lba
Ocean/Sea
Mediterranean Sea
Oceanic Region
Gulf of Lion
Latitude
43°12'0'' N (43.200 °)
Longitude
6°52'0'' E (6.867 °)
Isolation Depth
5
Isolated/Purified by
Vaulot D & Partensky F
Isolation Date
1989-01-04
ENVO
00000207
Sequencing Center
JGI
Genome Status
Complete
GenBank Acc.
BX548174
RefSeq Acc.
NC_005072
Genome Size
1,657,991
GC %
30.8
Number of CDS
1,962
Number of rRNA
3
Number of tRNA
37

Reference(s)

Rocap et al. (2003)

Comments

Strain isolated from a 50L barrel of sea water collected during leg2 of RRS discovery cruise D179 and brought back to Roscoff.
The MED4 strain was lost from the Roscoff Culture Collection (RCC151) but is co-identical with RCC1742.

Export

Genes / Proteins

FASTA format : CDS (.fna) / RNA (.fna) / All genes (.fna) / Proteins (.faa)

Whole Genome / All Contigs

FASTA format : Concatenated contigs (.fna) / All contigs (.fna) / Individual contigs (.fna - zipped if multiple)
GenBank format : Concatenated contigs (.gbk) / All contigs (.gbff) / Individual contigs (.gbk - zipped if multiple)
GFF format : All contigs (.gff)

All export files in Cyanorak are encoded using UTF-8 or Unicode encoding. Please select correct encoding when opening files to ensure special characters are displayed properly.