Cyanorak | Organism Details

Concatenated Contigs

Syn_A15-44

Description

Species
Synechococcus sp.
Strain
A15-44
RCC N°
2527
NCBI Taxonomy ID
1050646
Genus
Synechococcus
SubCluster/Phototype
5.1
Clade
II
SubClade
IIa
Ecotype/ESTU
IIA
Pigment Type
2
Ocean/Sea
Atlantic Ocean
Oceanic Region
Upwelling
Latitude
21°40'59'' N (21.683 °)
Longitude
17°49'59'' W (-17.833 °)
Isolation Depth
20
Isolated/Purified by
Zwirglmaier K
Isolation Date
2004-10-01
ENVO
00000207
Sequencing Center
Genoscope
Genome Status
Complete
GenBank Acc.
CP047938
RefSeq Acc.
NZ_CP047938
Genome Size
2,621,965
GC %
60.8
Number of CDS
3,141
Number of rRNA
9
Number of tRNA
46

Reference(s)

Doré et al. (2020)

Comments

Isolated during cruise AMT15 Sta. 8 CTD34.

Other name: A15-48a

Export

Genes / Proteins

FASTA format : CDS (.fna) / RNA (.fna) / All genes (.fna) / Proteins (.faa)

Whole Genome / All Contigs

FASTA format : Concatenated contigs (.fna) / All contigs (.fna) / Individual contigs (.fna - zipped if multiple)
GenBank format : Concatenated contigs (.gbk) / All contigs (.gbff) / Individual contigs (.gbk - zipped if multiple)
GFF format : All contigs (.gff)

All export files in Cyanorak are encoded using UTF-8 or Unicode encoding. Please select correct encoding when opening files to ensure special characters are displayed properly.