Cyanorak | Organism Details

Concatenated Contigs

Syn_BIOS-U3-1

Description

Species
Synechococcus sp.
Strain
BIOS-U3-1
RCC N°
2533
NCBI Taxonomy ID
1400865
Genus
Synechococcus
SubCluster/Phototype
5.1
Clade
CRD1
SubClade
CRD1
Ecotype/ESTU
CRD1B
Pigment Type
3dA
Ocean/Sea
Pacific Ocean
Oceanic Region
Chilean upwelling
Latitude
33°51'45'' S (-33.863 °)
Longitude
73°22'0'' W (-73.367 °)
Isolation Depth
5
Isolated/Purified by
Garczarek L & Marie D / Humily F
Isolation Date
2004-12-06
ENVO
01000005
Sequencing Center
Genoscope
Genome Status
Complete
GenBank Acc.
CP047936
RefSeq Acc.
NZ_CP047936
Genome Size
2,710,834
GC %
55.0
Number of CDS
3,395
Number of rRNA
6
Number of tRNA
44

Reference(s)

Doré et al. (2020)

Comments

Isolated during the Biosope cruise at Sta. UPW1 (CTD 198).

Other name: Biosope_199

Export

Genes / Proteins

FASTA format : CDS (.fna) / RNA (.fna) / All genes (.fna) / Proteins (.faa)

Whole Genome / All Contigs

FASTA format : Concatenated contigs (.fna) / All contigs (.fna) / Individual contigs (.fna - zipped if multiple)
GenBank format : Concatenated contigs (.gbk) / All contigs (.gbff) / Individual contigs (.gbk - zipped if multiple)
GFF format : All contigs (.gff)

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