Cyanorak | Organism Details

Concatenated Contigs

Syn_BOUM118

Description

Species
Synechococcus sp.
Strain
BOUM118
RCC N°
2379
NCBI Taxonomy ID
1442552
Genus
Synechococcus
SubCluster/Phototype
5.1
Clade
III
SubClade
IIIa
Ecotype/ESTU
IIIA
Pigment Type
3c
Ocean/Sea
Mediterranean Sea
Oceanic Region
n.a.
Latitude
33°37'59'' N (33.633 °)
Longitude
32°37'59'' E (32.633 °)
Isolation Depth
5
Isolated/Purified by
Garczarek L / Le Gall F
Isolation Date
2008-10-01
ENVO
00000207
Sequencing Center
Genoscope
Genome Status
WGS high quality
GenBank Acc.
CP047947
RefSeq Acc.
NZ_CP047947
Genome Size
2,326,334
GC %
59.8
Number of CDS
2,742
Number of rRNA
6
Number of tRNA
44

Reference(s)

Doré et al. (2020)

Comments

Isolated during BOUM cruise at Sta. C (CTD 48).

Export

Genes / Proteins

FASTA format : CDS (.fna) / RNA (.fna) / All genes (.fna) / Proteins (.faa)

Whole Genome / All Contigs

FASTA format : Concatenated contigs (.fna) / All contigs (.fna) / Individual contigs (.fna - zipped if multiple)
GenBank format : Concatenated contigs (.gbk) / All contigs (.gbff) / Individual contigs (.gbk - zipped if multiple)
GFF format : All contigs (.gff)

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