Cyanorak | Organism Details

Concatenated Contigs

Syn_KORDI-52

Description

Species
Synechococcus sp.
Strain
KORDI-52
RCC N°
NCBI Taxonomy ID
585425
Genus
Synechococcus
SubCluster/Phototype
5.1
Clade
II
SubClade
II-WPC2
Ecotype/ESTU
IIA
Pigment Type
3bB
Ocean/Sea
Pacific Ocean
Oceanic Region
East China Sea
Latitude
32°0'0'' N (32.000 °)
Longitude
126°45'0'' E (126.750 °)
Isolation Depth
30
Isolated/Purified by
Choi DH
Isolation Date
2005-05-13
ENVO
00000207
Sequencing Center
JGI
Genome Status
Complete
GenBank Acc.
CP006271
RefSeq Acc.
NZ_CP006271
Genome Size
2,572,069
GC %
59.1
Number of CDS
2,787
Number of rRNA
9
Number of tRNA
46

Reference(s)

Lee et al. (2019)
Doré et al. (2020)

Comments

16S rRNA and ITS phylogenies geographic origin and possible pigment type (Exc495:545 = 1.10 at 10 µE WL) of this strain are described in Choi & Noh (2009). See also Choi et al. (2014) for a more recent ITS phylogeny.

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GFF format : All contigs (.gff)

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