Cyanorak | Organism Details

Concatenated Contigs

Syn_M16.1

Description

Species
Synechococcus sp.
Strain
M16.1
RCC N°
791
NCBI Taxonomy ID
1442553
Genus
Synechococcus
SubCluster/Phototype
5.1
Clade
II
SubClade
IIa
Ecotype/ESTU
IIA
Pigment Type
3a
Ocean/Sea
Atlantic Ocean
Oceanic Region
Gulf of Mexico
Latitude
27°42'0'' N (27.700 °)
Longitude
91°18'0'' W (-91.300 °)
Isolation Depth
275
Isolated/Purified by
Everroad C
Isolation Date
2003-02-09
ENVO
00000207
Sequencing Center
Genoscope
Genome Status
Complete
GenBank Acc.
CP047954
RefSeq Acc.
NZ_CP047954
Genome Size
2,112,236
GC %
61.4
Number of CDS
2,496
Number of rRNA
6
Number of tRNA
45

Reference(s)

Doré et al. (2020)

Comments

Export

Genes / Proteins

FASTA format : CDS (.fna) / RNA (.fna) / All genes (.fna) / Proteins (.faa)

Whole Genome / All Contigs

FASTA format : Concatenated contigs (.fna) / All contigs (.fna) / Individual contigs (.fna - zipped if multiple)
GenBank format : Concatenated contigs (.gbk) / All contigs (.gbff) / Individual contigs (.gbk - zipped if multiple)
GFF format : All contigs (.gff)

All export files in Cyanorak are encoded using UTF-8 or Unicode encoding. Please select correct encoding when opening files to ensure special characters are displayed properly.