Cyanorak | Organism Details

Concatenated Contigs

Syn_SYN20

Description

Species
Synechococcus sp.
Strain
SYN20
RCC N°
2035
NCBI Taxonomy ID
1050714
Genus
Synechococcus
SubCluster/Phototype
5.1
Clade
I
SubClade
Ib
Ecotype/ESTU
IA
Pigment Type
3a
Ocean/Sea
North Sea
Oceanic Region
n.a.
Latitude
60°16'12'' N (60.270 °)
Longitude
5°12'29'' E (5.208 °)
Isolation Depth
2
Isolated/Purified by
Sandaa R-A
Isolation Date
2004-06-01
ENVO
00000207
Sequencing Center
CGR, Liverpool, UK
Genome Status
Complete
GenBank Acc.
CP047959
RefSeq Acc.
NZ_CP047959
Genome Size
2,728,628
GC %
53.4
Number of CDS
3,349
Number of rRNA
6
Number of tRNA
44

Reference(s)

Doré et al. (2020)

Comments

The strain was isolated as part of  a study that was carried out between March 3 and November 2, 2004 in Raunefjorden, a fjord located South of Bergen, a study published in Sandaa and Larsen (2006).

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Genes / Proteins

FASTA format : CDS (.fna) / RNA (.fna) / All genes (.fna) / Proteins (.faa)

Whole Genome / All Contigs

FASTA format : Concatenated contigs (.fna) / All contigs (.fna) / Individual contigs (.fna - zipped if multiple)
GenBank format : Concatenated contigs (.gbk) / All contigs (.gbff) / Individual contigs (.gbk - zipped if multiple)
GFF format : All contigs (.gff)

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